Protein–RNA interactions for Protein: P35737

H2-DMb1, Class II histocompatibility antigen, M beta 1 chain, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-DMb1P35737 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-DMb1P35737 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-DMb1P35737 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-DMb1P35737 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2-DMb1P35737 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
H2-DMb1P35737 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2-DMb1P35737 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Gm10849-201ENSMUST00000100397 618 ntBASIC14.33□□□□□ -0.12
H2-DMb1P35737 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-DMb1P35737 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.33□□□□□ -0.12
H2-DMb1P35737 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Reep4-203ENSMUST00000226563 1444 ntBASIC14.32□□□□□ -0.12
H2-DMb1P35737 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.32□□□□□ -0.12
H2-DMb1P35737 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.32□□□□□ -0.12
H2-DMb1P35737 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.32□□□□□ -0.12
H2-DMb1P35737 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-DMb1P35737 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.31□□□□□ -0.12
H2-DMb1P35737 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2-DMb1P35737 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.3□□□□□ -0.12
H2-DMb1P35737 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Gm13234-201ENSMUST00000120010 747 ntBASIC14.3□□□□□ -0.12
H2-DMb1P35737 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
H2-DMb1P35737 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2-DMb1P35737 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.29□□□□□ -0.12
H2-DMb1P35737 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-DMb1P35737 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2-DMb1P35737 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms