Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nedd8P29595 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nedd8P29595 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nedd8P29595 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nedd8P29595 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nedd8P29595 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.24■□□□□ 0.35
Nedd8P29595 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
Nedd8P29595 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.24■□□□□ 0.35
Nedd8P29595 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nedd8P29595 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.24■□□□□ 0.35
Nedd8P29595 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.24■□□□□ 0.35
Nedd8P29595 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nedd8P29595 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nedd8P29595 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.23■□□□□ 0.35
Nedd8P29595 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nedd8P29595 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nedd8P29595 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nedd8P29595 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.22■□□□□ 0.35
Nedd8P29595 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nedd8P29595 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nedd8P29595 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Nedd8P29595 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.22■□□□□ 0.35
Nedd8P29595 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Nedd8P29595 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nedd8P29595 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nedd8P29595 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.21■□□□□ 0.35
Nedd8P29595 Gm10420-201ENSMUST00000121713 882 ntBASIC17.21■□□□□ 0.35
Nedd8P29595 Gm10399-202ENSMUST00000202768 748 ntBASIC17.21■□□□□ 0.35
Nedd8P29595 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.21■□□□□ 0.35
Nedd8P29595 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nedd8P29595 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.2■□□□□ 0.34
Nedd8P29595 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nedd8P29595 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.2■□□□□ 0.34
Nedd8P29595 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nedd8P29595 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.2■□□□□ 0.34
Nedd8P29595 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nedd8P29595 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.19■□□□□ 0.34
Nedd8P29595 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nedd8P29595 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nedd8P29595 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.19■□□□□ 0.34
Nedd8P29595 Gm43530-201ENSMUST00000195920 274 ntBASIC17.19■□□□□ 0.34
Nedd8P29595 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms