Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aldh1a1P24549 Gm21814-202ENSMUST00000203277 873 ntBASIC20.03■□□□□ 0.8
Aldh1a1P24549 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aldh1a1P24549 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aldh1a1P24549 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.03■□□□□ 0.8
Aldh1a1P24549 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aldh1a1P24549 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aldh1a1P24549 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aldh1a1P24549 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.02■□□□□ 0.8
Aldh1a1P24549 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Aldh1a1P24549 Gm30025-201ENSMUST00000218555 728 ntBASIC20.02■□□□□ 0.8
Aldh1a1P24549 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aldh1a1P24549 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aldh1a1P24549 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Aldh1a1P24549 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Aldh1a1P24549 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Aldh1a1P24549 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.01■□□□□ 0.79
Aldh1a1P24549 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Aldh1a1P24549 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20■□□□□ 0.79
Aldh1a1P24549 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20■□□□□ 0.79
Aldh1a1P24549 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Aldh1a1P24549 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20■□□□□ 0.79
Aldh1a1P24549 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Aldh1a1P24549 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Gm10138-203ENSMUST00000206952 366 ntBASIC19.99■□□□□ 0.79
Aldh1a1P24549 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Aldh1a1P24549 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Gm43183-201ENSMUST00000200632 547 ntBASIC19.98■□□□□ 0.79
Aldh1a1P24549 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.98■□□□□ 0.79
Aldh1a1P24549 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Aldh1a1P24549 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Gm21362-201ENSMUST00000194272 928 ntBASIC19.97■□□□□ 0.79
Aldh1a1P24549 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Aldh1a1P24549 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.96■□□□□ 0.79
Aldh1a1P24549 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.96■□□□□ 0.79
Aldh1a1P24549 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Aldh1a1P24549 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.95■□□□□ 0.78
Aldh1a1P24549 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.95■□□□□ 0.78
Aldh1a1P24549 Odf3b-204ENSMUST00000227834 930 ntBASIC19.95■□□□□ 0.78
Aldh1a1P24549 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Zfp783-201ENSMUST00000095946 670 ntBASIC19.95■□□□□ 0.78
Aldh1a1P24549 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Aldh1a1P24549 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms