Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Nespas-201ENSMUST00000143738 1083 ntBASIC20.55■□□□□ 0.88
Msh3P13705 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Msh3P13705 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Msh3P13705 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.55■□□□□ 0.88
Msh3P13705 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.55■□□□□ 0.88
Msh3P13705 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.55■□□□□ 0.88
Msh3P13705 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Msh3P13705 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Msh3P13705 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.55■□□□□ 0.88
Msh3P13705 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh3P13705 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh3P13705 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Msh3P13705 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.54■□□□□ 0.88
Msh3P13705 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.54■□□□□ 0.88
Msh3P13705 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh3P13705 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh3P13705 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Msh3P13705 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh3P13705 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Msh3P13705 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Msh3P13705 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh3P13705 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh3P13705 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh3P13705 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.52■□□□□ 0.88
Msh3P13705 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh3P13705 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh3P13705 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Msh3P13705 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh3P13705 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.51■□□□□ 0.87
Msh3P13705 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.51■□□□□ 0.87
Msh3P13705 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.51■□□□□ 0.87
Msh3P13705 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh3P13705 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh3P13705 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh3P13705 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Msh3P13705 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh3P13705 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Msh3P13705 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh3P13705 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.49■□□□□ 0.87
Msh3P13705 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.49■□□□□ 0.87
Msh3P13705 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh3P13705 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh3P13705 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh3P13705 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.49■□□□□ 0.87
Msh3P13705 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh3P13705 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Msh3P13705 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.48■□□□□ 0.87
Msh3P13705 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh3P13705 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh3P13705 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.46■□□□□ 0.87
Msh3P13705 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Msh3P13705 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.46■□□□□ 0.87
Msh3P13705 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh3P13705 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Msh3P13705 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms