Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.48■□□□□ 0.39
Nid1P10493 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nid1P10493 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.47■□□□□ 0.39
Nid1P10493 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.47■□□□□ 0.39
Nid1P10493 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nid1P10493 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nid1P10493 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Nid1P10493 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nid1P10493 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Nid1P10493 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nid1P10493 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nid1P10493 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nid1P10493 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nid1P10493 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nid1P10493 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nid1P10493 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nid1P10493 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.45■□□□□ 0.38
Nid1P10493 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nid1P10493 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Nid1P10493 Gm9988-201ENSMUST00000069786 435 ntBASIC17.45■□□□□ 0.38
Nid1P10493 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nid1P10493 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nid1P10493 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nid1P10493 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Nid1P10493 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nid1P10493 Reep4-203ENSMUST00000226563 1444 ntBASIC17.45■□□□□ 0.38
Nid1P10493 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.45■□□□□ 0.38
Nid1P10493 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nid1P10493 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.44■□□□□ 0.38
Nid1P10493 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.44■□□□□ 0.38
Nid1P10493 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Nid1P10493 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Nid1P10493 Gm13534-201ENSMUST00000121169 513 ntBASIC17.44■□□□□ 0.38
Nid1P10493 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.44■□□□□ 0.38
Nid1P10493 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nid1P10493 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nid1P10493 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nid1P10493 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Nid1P10493 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.43■□□□□ 0.38
Nid1P10493 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nid1P10493 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.43■□□□□ 0.38
Nid1P10493 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nid1P10493 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.43■□□□□ 0.38
Nid1P10493 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.43■□□□□ 0.38
Nid1P10493 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
Nid1P10493 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nid1P10493 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Nid1P10493 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.43■□□□□ 0.38
Nid1P10493 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nid1P10493 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nid1P10493 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nid1P10493 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.42■□□□□ 0.38
Nid1P10493 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nid1P10493 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
Nid1P10493 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
Nid1P10493 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.42■□□□□ 0.38
Nid1P10493 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.42■□□□□ 0.38
Nid1P10493 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
Nid1P10493 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Nid1P10493 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nid1P10493 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.42■□□□□ 0.38
Nid1P10493 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms