Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2aP08775 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.48■■□□□ 1.03
Polr2aP08775 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2aP08775 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.48■■□□□ 1.03
Polr2aP08775 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2aP08775 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.48■■□□□ 1.03
Polr2aP08775 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2aP08775 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.47■■□□□ 1.03
Polr2aP08775 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Gm6345-202ENSMUST00000180900 204 ntBASIC21.47■■□□□ 1.03
Polr2aP08775 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Polr2aP08775 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2aP08775 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Polr2aP08775 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.46■■□□□ 1.03
Polr2aP08775 Gm18032-201ENSMUST00000222541 538 ntBASIC21.46■■□□□ 1.03
Polr2aP08775 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.46■■□□□ 1.03
Polr2aP08775 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2aP08775 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Polr2aP08775 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.45■■□□□ 1.02
Polr2aP08775 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 Gm10138-203ENSMUST00000206952 366 ntBASIC21.45■■□□□ 1.02
Polr2aP08775 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.45■■□□□ 1.02
Polr2aP08775 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2aP08775 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.44■■□□□ 1.02
Polr2aP08775 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2aP08775 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Polr2aP08775 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Polr2aP08775 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.43■■□□□ 1.02
Polr2aP08775 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Gm18959-201ENSMUST00000208954 655 ntBASIC21.43■■□□□ 1.02
Polr2aP08775 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2aP08775 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Polr2aP08775 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2aP08775 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2aP08775 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2aP08775 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2aP08775 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2aP08775 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2aP08775 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Polr2aP08775 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2aP08775 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2aP08775 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2aP08775 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2aP08775 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Polr2aP08775 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2aP08775 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.41■■□□□ 1.02
Polr2aP08775 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2aP08775 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Polr2aP08775 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Polr2aP08775 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Gm10013-201ENSMUST00000106074 672 ntBASIC21.4■■□□□ 1.02
Polr2aP08775 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Polr2aP08775 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.4■■□□□ 1.02
Polr2aP08775 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.4■■□□□ 1.02
Polr2aP08775 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2aP08775 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Polr2aP08775 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Polr2aP08775 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Polr2aP08775 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Polr2aP08775 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Polr2aP08775 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Polr2aP08775 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.39■■□□□ 1.01
Polr2aP08775 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Polr2aP08775 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms