Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col4a2P08122 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a2P08122 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col4a2P08122 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.49■□□□□ 0.39
Col4a2P08122 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col4a2P08122 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col4a2P08122 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.49■□□□□ 0.39
Col4a2P08122 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a2P08122 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.49■□□□□ 0.39
Col4a2P08122 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col4a2P08122 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Col4a2P08122 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col4a2P08122 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.48■□□□□ 0.39
Col4a2P08122 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a2P08122 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col4a2P08122 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col4a2P08122 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a2P08122 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.47■□□□□ 0.39
Col4a2P08122 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Col4a2P08122 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.47■□□□□ 0.39
Col4a2P08122 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a2P08122 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.46■□□□□ 0.39
Col4a2P08122 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 Gm11927-201ENSMUST00000118472 759 ntBASIC17.46■□□□□ 0.39
Col4a2P08122 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a2P08122 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a2P08122 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col4a2P08122 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col4a2P08122 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.45■□□□□ 0.38
Col4a2P08122 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.45■□□□□ 0.38
Col4a2P08122 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.45■□□□□ 0.38
Col4a2P08122 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.45■□□□□ 0.38
Col4a2P08122 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col4a2P08122 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a2P08122 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col4a2P08122 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.44■□□□□ 0.38
Col4a2P08122 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Col4a2P08122 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.44■□□□□ 0.38
Col4a2P08122 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a2P08122 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a2P08122 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a2P08122 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a2P08122 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.43■□□□□ 0.38
Col4a2P08122 Gm43799-201ENSMUST00000201845 579 ntBASIC17.43■□□□□ 0.38
Col4a2P08122 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.43■□□□□ 0.38
Col4a2P08122 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a2P08122 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms