Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
P06328 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
P06328 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
P06328 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06328 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
P06328 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
P06328 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
P06328 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.6□□□□□ -0.23
P06328 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
P06328 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
P06328 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.6□□□□□ -0.23
P06328 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06328 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.59□□□□□ -0.23
P06328 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.59□□□□□ -0.23
P06328 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
P06328 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.59□□□□□ -0.23
P06328 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
P06328 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06328 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
P06328 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P06328 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
P06328 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
P06328 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P06328 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
P06328 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Gm12821-201ENSMUST00000120022 600 ntBASIC13.58□□□□□ -0.24
P06328 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
P06328 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
P06328 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
P06328 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.58□□□□□ -0.24
P06328 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.58□□□□□ -0.24
P06328 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.58□□□□□ -0.24
P06328 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06328 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
P06328 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.57□□□□□ -0.24
P06328 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
P06328 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
P06328 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
P06328 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.57□□□□□ -0.24
P06328 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
P06328 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P06328 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.57□□□□□ -0.24
P06328 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
P06328 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06328 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms