Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
P01788 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P01788 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P01788 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P01788 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P01788 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
P01788 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P01788 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.67□□□□□ -0.06
P01788 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.67□□□□□ -0.06
P01788 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.67□□□□□ -0.06
P01788 Gm9847-201ENSMUST00000052528 599 ntBASIC14.67□□□□□ -0.06
P01788 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.67□□□□□ -0.06
P01788 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P01788 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
P01788 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
P01788 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
P01788 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.66□□□□□ -0.06
P01788 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.66□□□□□ -0.06
P01788 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
P01788 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.66□□□□□ -0.06
P01788 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.66□□□□□ -0.06
P01788 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P01788 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.65□□□□□ -0.06
P01788 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.65□□□□□ -0.06
P01788 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.65□□□□□ -0.06
P01788 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.65□□□□□ -0.06
P01788 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
P01788 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
P01788 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
P01788 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01788 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.64□□□□□ -0.07
P01788 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
P01788 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.64□□□□□ -0.07
P01788 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01788 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
P01788 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
P01788 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
P01788 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Gm7860-201ENSMUST00000121190 879 ntBASIC14.63□□□□□ -0.07
P01788 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
P01788 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.63□□□□□ -0.07
P01788 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.63□□□□□ -0.07
P01788 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01788 Fst-202ENSMUST00000223640 2612 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms