Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CopeO89079 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CopeO89079 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CopeO89079 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CopeO89079 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.19■□□□□ 0.66
CopeO89079 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.19■□□□□ 0.66
CopeO89079 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CopeO89079 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.19■□□□□ 0.66
CopeO89079 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 Gm43137-201ENSMUST00000198052 594 ntBASIC19.19■□□□□ 0.66
CopeO89079 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CopeO89079 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CopeO89079 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CopeO89079 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Gm7860-201ENSMUST00000121190 879 ntBASIC19.18■□□□□ 0.66
CopeO89079 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.18■□□□□ 0.66
CopeO89079 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.18■□□□□ 0.66
CopeO89079 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CopeO89079 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CopeO89079 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
CopeO89079 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CopeO89079 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CopeO89079 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.17■□□□□ 0.66
CopeO89079 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CopeO89079 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CopeO89079 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.16■□□□□ 0.66
CopeO89079 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.16■□□□□ 0.66
CopeO89079 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.16■□□□□ 0.66
CopeO89079 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CopeO89079 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CopeO89079 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
CopeO89079 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CopeO89079 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.15■□□□□ 0.66
CopeO89079 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.15■□□□□ 0.66
CopeO89079 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.15■□□□□ 0.66
CopeO89079 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CopeO89079 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CopeO89079 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CopeO89079 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CopeO89079 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CopeO89079 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CopeO89079 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CopeO89079 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CopeO89079 Gm9847-201ENSMUST00000052528 599 ntBASIC19.14■□□□□ 0.65
CopeO89079 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CopeO89079 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CopeO89079 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.13■□□□□ 0.65
CopeO89079 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CopeO89079 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CopeO89079 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CopeO89079 Gm12251-201ENSMUST00000117893 792 ntBASIC19.13■□□□□ 0.65
CopeO89079 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CopeO89079 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms