Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Gm7860-201ENSMUST00000121190 879 ntBASIC18.06■□□□□ 0.48
ClppO88696 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.06■□□□□ 0.48
ClppO88696 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClppO88696 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.05■□□□□ 0.48
ClppO88696 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.05■□□□□ 0.48
ClppO88696 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
ClppO88696 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.05■□□□□ 0.48
ClppO88696 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClppO88696 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.04■□□□□ 0.48
ClppO88696 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.04■□□□□ 0.48
ClppO88696 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.04■□□□□ 0.48
ClppO88696 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Gm6420-201ENSMUST00000193885 723 ntBASIC18.04■□□□□ 0.48
ClppO88696 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.04■□□□□ 0.48
ClppO88696 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClppO88696 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.03■□□□□ 0.48
ClppO88696 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClppO88696 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ClppO88696 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClppO88696 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.02■□□□□ 0.48
ClppO88696 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClppO88696 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClppO88696 Gm13148-201ENSMUST00000118892 745 ntBASIC18.02■□□□□ 0.48
ClppO88696 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ClppO88696 Gm6211-202ENSMUST00000167849 925 ntBASIC18.02■□□□□ 0.48
ClppO88696 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ClppO88696 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ClppO88696 Gm20760-201ENSMUST00000179197 648 ntBASIC18.02■□□□□ 0.48
ClppO88696 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.02■□□□□ 0.48
ClppO88696 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ClppO88696 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ClppO88696 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ClppO88696 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
ClppO88696 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ClppO88696 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ClppO88696 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ClppO88696 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.01■□□□□ 0.47
ClppO88696 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.01■□□□□ 0.47
ClppO88696 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ClppO88696 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ClppO88696 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ClppO88696 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ClppO88696 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClppO88696 Fst-202ENSMUST00000223640 2612 ntBASIC18.01■□□□□ 0.47
ClppO88696 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ClppO88696 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClppO88696 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms