Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.7■□□□□ 0.42
Vti1bO88384 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.7■□□□□ 0.42
Vti1bO88384 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vti1bO88384 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.69■□□□□ 0.42
Vti1bO88384 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vti1bO88384 Gm40848-201ENSMUST00000221998 324 ntBASIC17.69■□□□□ 0.42
Vti1bO88384 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vti1bO88384 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vti1bO88384 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.68■□□□□ 0.42
Vti1bO88384 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vti1bO88384 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vti1bO88384 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vti1bO88384 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Vti1bO88384 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vti1bO88384 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.67■□□□□ 0.42
Vti1bO88384 Gm43060-201ENSMUST00000200621 289 ntBASIC17.67■□□□□ 0.42
Vti1bO88384 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vti1bO88384 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.67■□□□□ 0.42
Vti1bO88384 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1bO88384 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.67■□□□□ 0.42
Vti1bO88384 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.67■□□□□ 0.42
Vti1bO88384 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vti1bO88384 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.66■□□□□ 0.42
Vti1bO88384 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vti1bO88384 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1bO88384 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.66■□□□□ 0.42
Vti1bO88384 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.65■□□□□ 0.42
Vti1bO88384 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vti1bO88384 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vti1bO88384 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.65■□□□□ 0.42
Vti1bO88384 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.65■□□□□ 0.42
Vti1bO88384 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vti1bO88384 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vti1bO88384 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vti1bO88384 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1bO88384 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms