Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm10139O88245 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.35□□□□□ -0.59
Gm10139O88245 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.35□□□□□ -0.59
Gm10139O88245 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Gm40848-201ENSMUST00000221998 324 ntBASIC11.35□□□□□ -0.59
Gm10139O88245 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Gm42922-201ENSMUST00000195887 2078 ntBASIC11.35□□□□□ -0.59
Gm10139O88245 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10139O88245 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gm10139O88245 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gm10139O88245 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gm10139O88245 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.34□□□□□ -0.59
Gm10139O88245 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.34□□□□□ -0.59
Gm10139O88245 Gm38205-201ENSMUST00000192243 258 ntBASIC11.34□□□□□ -0.59
Gm10139O88245 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.34□□□□□ -0.59
Gm10139O88245 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10139O88245 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gm10139O88245 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gm10139O88245 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gm10139O88245 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gm10139O88245 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm10139O88245 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.33□□□□□ -0.6
Gm10139O88245 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.33□□□□□ -0.6
Gm10139O88245 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm10139O88245 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Gm10139O88245 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10139O88245 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Gm42939-201ENSMUST00000197514 2205 ntBASIC11.32□□□□□ -0.6
Gm10139O88245 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.32□□□□□ -0.6
Gm10139O88245 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Gm10139O88245 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Gm10139O88245 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Rarb-207ENSMUST00000225921 2756 ntBASIC11.32□□□□□ -0.6
Gm10139O88245 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10139O88245 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10139O88245 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10139O88245 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms