Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.61■□□□□ 0.73
Ttc3O88196 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.61■□□□□ 0.73
Ttc3O88196 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc3O88196 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.6■□□□□ 0.73
Ttc3O88196 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc3O88196 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc3O88196 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc3O88196 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc3O88196 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ttc3O88196 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ttc3O88196 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc3O88196 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ttc3O88196 Mir7071-201ENSMUST00000184847 69 ntBASIC19.59■□□□□ 0.73
Ttc3O88196 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc3O88196 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.59■□□□□ 0.73
Ttc3O88196 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc3O88196 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc3O88196 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.59■□□□□ 0.73
Ttc3O88196 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.59■□□□□ 0.73
Ttc3O88196 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Ttc3O88196 Zfp783-201ENSMUST00000095946 670 ntBASIC19.59■□□□□ 0.73
Ttc3O88196 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc3O88196 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc3O88196 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc3O88196 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc3O88196 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.58■□□□□ 0.73
Ttc3O88196 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc3O88196 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ttc3O88196 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc3O88196 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.58■□□□□ 0.72
Ttc3O88196 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc3O88196 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Ttc3O88196 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Ttc3O88196 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.57■□□□□ 0.72
Ttc3O88196 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc3O88196 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc3O88196 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc3O88196 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc3O88196 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ttc3O88196 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc3O88196 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.57■□□□□ 0.72
Ttc3O88196 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ttc3O88196 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ttc3O88196 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.56■□□□□ 0.72
Ttc3O88196 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.56■□□□□ 0.72
Ttc3O88196 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Ttc3O88196 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.56■□□□□ 0.72
Ttc3O88196 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc3O88196 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ttc3O88196 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc3O88196 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.55■□□□□ 0.72
Ttc3O88196 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.55■□□□□ 0.72
Ttc3O88196 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc3O88196 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc3O88196 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc3O88196 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
Ttc3O88196 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc3O88196 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ttc3O88196 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc3O88196 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc3O88196 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc3O88196 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ttc3O88196 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Ttc3O88196 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc3O88196 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.53■□□□□ 0.72
Ttc3O88196 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc3O88196 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.53■□□□□ 0.72
Ttc3O88196 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ttc3O88196 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ttc3O88196 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc3O88196 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc3O88196 Mir1199-201ENSMUST00000117015 119 ntBASIC19.52■□□□□ 0.72
Ttc3O88196 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.52■□□□□ 0.72
Ttc3O88196 Mtag2-201ENSMUST00000058665 714 ntBASIC19.52■□□□□ 0.72
Ttc3O88196 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc3O88196 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.52■□□□□ 0.72
Ttc3O88196 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ttc3O88196 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.52■□□□□ 0.71
Ttc3O88196 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ttc3O88196 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms