Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.36■□□□□ 0.53
Pdlim1O70400 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Gm6211-202ENSMUST00000167849 925 ntBASIC18.35■□□□□ 0.53
Pdlim1O70400 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.35■□□□□ 0.53
Pdlim1O70400 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim1O70400 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.34■□□□□ 0.53
Pdlim1O70400 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pdlim1O70400 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.34■□□□□ 0.53
Pdlim1O70400 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pdlim1O70400 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Pdlim1O70400 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.34■□□□□ 0.53
Pdlim1O70400 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pdlim1O70400 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim1O70400 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Pdlim1O70400 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pdlim1O70400 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim1O70400 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim1O70400 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim1O70400 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim1O70400 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim1O70400 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.33■□□□□ 0.52
Pdlim1O70400 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim1O70400 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pdlim1O70400 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.33■□□□□ 0.52
Pdlim1O70400 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim1O70400 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pdlim1O70400 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pdlim1O70400 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim1O70400 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.32■□□□□ 0.52
Pdlim1O70400 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim1O70400 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim1O70400 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim1O70400 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
Pdlim1O70400 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim1O70400 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim1O70400 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim1O70400 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim1O70400 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.32■□□□□ 0.52
Pdlim1O70400 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.31■□□□□ 0.52
Pdlim1O70400 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.31■□□□□ 0.52
Pdlim1O70400 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim1O70400 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.31■□□□□ 0.52
Pdlim1O70400 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pdlim1O70400 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.3■□□□□ 0.52
Pdlim1O70400 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pdlim1O70400 Gm10602-201ENSMUST00000098239 609 ntBASIC18.3■□□□□ 0.52
Pdlim1O70400 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pdlim1O70400 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pdlim1O70400 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim1O70400 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms