Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.71■□□□□ 0.91
Itgb5O70309 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Itgb5O70309 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Itgb5O70309 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Itgb5O70309 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.7■□□□□ 0.9
Itgb5O70309 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Itgb5O70309 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Itgb5O70309 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.7■□□□□ 0.9
Itgb5O70309 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.7■□□□□ 0.9
Itgb5O70309 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Itgb5O70309 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Itgb5O70309 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Itgb5O70309 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb5O70309 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Itgb5O70309 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb5O70309 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.69■□□□□ 0.9
Itgb5O70309 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb5O70309 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb5O70309 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Itgb5O70309 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.69■□□□□ 0.9
Itgb5O70309 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb5O70309 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Itgb5O70309 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Itgb5O70309 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb5O70309 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.69■□□□□ 0.9
Itgb5O70309 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Itgb5O70309 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Gm11249-201ENSMUST00000117071 859 ntBASIC20.68■□□□□ 0.9
Itgb5O70309 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb5O70309 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Itgb5O70309 Gm2399-201ENSMUST00000104944 225 ntBASIC20.67■□□□□ 0.9
Itgb5O70309 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.67■□□□□ 0.9
Itgb5O70309 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.67■□□□□ 0.9
Itgb5O70309 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb5O70309 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb5O70309 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.66■□□□□ 0.9
Itgb5O70309 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb5O70309 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb5O70309 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb5O70309 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb5O70309 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb5O70309 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.65■□□□□ 0.9
Itgb5O70309 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb5O70309 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itgb5O70309 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itgb5O70309 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Itgb5O70309 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.64■□□□□ 0.89
Itgb5O70309 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.64■□□□□ 0.89
Itgb5O70309 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Itgb5O70309 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Itgb5O70309 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb5O70309 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.63■□□□□ 0.89
Itgb5O70309 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Gm5643-201ENSMUST00000117081 966 ntBASIC20.63■□□□□ 0.89
Itgb5O70309 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.63■□□□□ 0.89
Itgb5O70309 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.63■□□□□ 0.89
Itgb5O70309 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.63■□□□□ 0.89
Itgb5O70309 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb5O70309 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.63■□□□□ 0.89
Itgb5O70309 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms