Protein–RNA interactions for Protein: O55033

Nck2, Cytoplasmic protein NCK2, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck2O55033 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.31■■□□□ 1
Nck2O55033 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nck2O55033 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nck2O55033 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nck2O55033 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nck2O55033 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nck2O55033 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nck2O55033 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
Nck2O55033 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nck2O55033 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Nck2O55033 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nck2O55033 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nck2O55033 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nck2O55033 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nck2O55033 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Nck2O55033 Mir1199-201ENSMUST00000117015 119 ntBASIC21.3■■□□□ 1
Nck2O55033 Gm37055-201ENSMUST00000191866 133 ntBASIC21.3■■□□□ 1
Nck2O55033 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nck2O55033 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nck2O55033 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nck2O55033 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nck2O55033 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nck2O55033 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.29■■□□□ 1
Nck2O55033 Gm15565-201ENSMUST00000118890 427 ntBASIC21.29■■□□□ 1
Nck2O55033 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.29■■□□□ 1
Nck2O55033 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nck2O55033 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Gm11249-201ENSMUST00000117071 859 ntBASIC21.28■■□□□ 1
Nck2O55033 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nck2O55033 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nck2O55033 Gm10698-201ENSMUST00000182663 604 ntBASIC21.27■■□□□ 1
Nck2O55033 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.27■■□□□ 1
Nck2O55033 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nck2O55033 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nck2O55033 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.27■□□□□ 0.99
Nck2O55033 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nck2O55033 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
Nck2O55033 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Nck2O55033 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Nck2O55033 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.26■□□□□ 0.99
Nck2O55033 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.26■□□□□ 0.99
Nck2O55033 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Nck2O55033 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.26■□□□□ 0.99
Nck2O55033 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.26■□□□□ 0.99
Nck2O55033 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nck2O55033 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nck2O55033 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nck2O55033 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.25■□□□□ 0.99
Nck2O55033 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.25■□□□□ 0.99
Nck2O55033 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nck2O55033 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.24■□□□□ 0.99
Nck2O55033 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.24■□□□□ 0.99
Nck2O55033 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Nck2O55033 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck2O55033 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nck2O55033 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nck2O55033 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nck2O55033 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms