Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Gm18025-201ENSMUST00000221733 862 ntBASIC17.97■□□□□ 0.47
Cacna1bO55017 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.97■□□□□ 0.47
Cacna1bO55017 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.97■□□□□ 0.47
Cacna1bO55017 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1bO55017 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.96■□□□□ 0.47
Cacna1bO55017 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1bO55017 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Gm21362-201ENSMUST00000194272 928 ntBASIC17.96■□□□□ 0.47
Cacna1bO55017 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1bO55017 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cacna1bO55017 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1bO55017 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1bO55017 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.95■□□□□ 0.46
Cacna1bO55017 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1bO55017 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1bO55017 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1bO55017 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1bO55017 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1bO55017 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1bO55017 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Odf3b-204ENSMUST00000227834 930 ntBASIC17.94■□□□□ 0.46
Cacna1bO55017 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cacna1bO55017 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.94■□□□□ 0.46
Cacna1bO55017 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.94■□□□□ 0.46
Cacna1bO55017 Gm7889-201ENSMUST00000185591 958 ntBASIC17.94■□□□□ 0.46
Cacna1bO55017 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cacna1bO55017 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1bO55017 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cacna1bO55017 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1bO55017 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cacna1bO55017 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1bO55017 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cacna1bO55017 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.92■□□□□ 0.46
Cacna1bO55017 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.92■□□□□ 0.46
Cacna1bO55017 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1bO55017 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1bO55017 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.91■□□□□ 0.46
Cacna1bO55017 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cacna1bO55017 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1bO55017 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1bO55017 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.91■□□□□ 0.46
Cacna1bO55017 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cacna1bO55017 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1bO55017 Flg-201ENSMUST00000050758 1488 ntBASIC17.91■□□□□ 0.46
Cacna1bO55017 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1bO55017 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1bO55017 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.9■□□□□ 0.46
Cacna1bO55017 Gm11539-201ENSMUST00000119837 557 ntBASIC17.9■□□□□ 0.46
Cacna1bO55017 Gm13436-201ENSMUST00000120418 567 ntBASIC17.9■□□□□ 0.46
Cacna1bO55017 Gm13559-201ENSMUST00000120476 863 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms