Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sptlc1O35704 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sptlc1O35704 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Sptlc1O35704 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sptlc1O35704 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sptlc1O35704 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sptlc1O35704 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sptlc1O35704 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sptlc1O35704 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.35■□□□□ 0.85
Sptlc1O35704 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sptlc1O35704 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sptlc1O35704 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.34■□□□□ 0.85
Sptlc1O35704 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.34■□□□□ 0.85
Sptlc1O35704 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sptlc1O35704 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.34■□□□□ 0.85
Sptlc1O35704 Mir7071-201ENSMUST00000184847 69 ntBASIC20.34■□□□□ 0.85
Sptlc1O35704 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.34■□□□□ 0.85
Sptlc1O35704 Gm18666-201ENSMUST00000190039 958 ntBASIC20.34■□□□□ 0.85
Sptlc1O35704 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sptlc1O35704 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sptlc1O35704 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.34■□□□□ 0.85
Sptlc1O35704 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptlc1O35704 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sptlc1O35704 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.33■□□□□ 0.85
Sptlc1O35704 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sptlc1O35704 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.33■□□□□ 0.85
Sptlc1O35704 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Sptlc1O35704 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.33■□□□□ 0.85
Sptlc1O35704 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Sptlc1O35704 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Sptlc1O35704 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sptlc1O35704 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Sptlc1O35704 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.32■□□□□ 0.84
Sptlc1O35704 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Sptlc1O35704 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Sptlc1O35704 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sptlc1O35704 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptlc1O35704 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptlc1O35704 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptlc1O35704 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sptlc1O35704 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.31■□□□□ 0.84
Sptlc1O35704 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sptlc1O35704 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sptlc1O35704 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Sptlc1O35704 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.3■□□□□ 0.84
Sptlc1O35704 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.3■□□□□ 0.84
Sptlc1O35704 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.3■□□□□ 0.84
Sptlc1O35704 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptlc1O35704 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.29■□□□□ 0.84
Sptlc1O35704 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Gm6576-201ENSMUST00000169678 883 ntBASIC20.29■□□□□ 0.84
Sptlc1O35704 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.29■□□□□ 0.84
Sptlc1O35704 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sptlc1O35704 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms