Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.15■□□□□ 0.34
Capn1O35350 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Capn1O35350 Gm7860-201ENSMUST00000121190 879 ntBASIC17.15■□□□□ 0.34
Capn1O35350 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.15■□□□□ 0.34
Capn1O35350 Gm10653-202ENSMUST00000139570 835 ntBASIC17.15■□□□□ 0.34
Capn1O35350 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.15■□□□□ 0.34
Capn1O35350 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.15■□□□□ 0.34
Capn1O35350 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Capn1O35350 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Capn1O35350 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Capn1O35350 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.15■□□□□ 0.34
Capn1O35350 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Capn1O35350 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Capn1O35350 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.14■□□□□ 0.33
Capn1O35350 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
Capn1O35350 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Capn1O35350 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Capn1O35350 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Capn1O35350 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Capn1O35350 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Capn1O35350 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Capn1O35350 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Capn1O35350 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.13■□□□□ 0.33
Capn1O35350 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Capn1O35350 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Gm12527-201ENSMUST00000117967 564 ntBASIC17.12■□□□□ 0.33
Capn1O35350 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.12■□□□□ 0.33
Capn1O35350 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.12■□□□□ 0.33
Capn1O35350 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Capn1O35350 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.11■□□□□ 0.33
Capn1O35350 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Capn1O35350 Gm6211-202ENSMUST00000167849 925 ntBASIC17.11■□□□□ 0.33
Capn1O35350 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Capn1O35350 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Capn1O35350 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.1■□□□□ 0.33
Capn1O35350 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Capn1O35350 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Capn1O35350 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Capn1O35350 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Capn1O35350 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Capn1O35350 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms