Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf2O35218 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf2O35218 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf2O35218 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf2O35218 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.83■□□□□ 0.77
Cpsf2O35218 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf2O35218 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf2O35218 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.83■□□□□ 0.77
Cpsf2O35218 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf2O35218 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf2O35218 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf2O35218 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf2O35218 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf2O35218 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf2O35218 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf2O35218 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cpsf2O35218 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.82■□□□□ 0.76
Cpsf2O35218 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Gm43017-201ENSMUST00000198296 752 ntBASIC19.82■□□□□ 0.76
Cpsf2O35218 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf2O35218 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf2O35218 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cpsf2O35218 Rarb-207ENSMUST00000225921 2756 ntBASIC19.81■□□□□ 0.76
Cpsf2O35218 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.81■□□□□ 0.76
Cpsf2O35218 Gm26833-201ENSMUST00000180899 440 ntBASIC19.81■□□□□ 0.76
Cpsf2O35218 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.81■□□□□ 0.76
Cpsf2O35218 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cpsf2O35218 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf2O35218 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf2O35218 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Cpsf2O35218 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.8■□□□□ 0.76
Cpsf2O35218 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf2O35218 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf2O35218 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.79■□□□□ 0.76
Cpsf2O35218 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cpsf2O35218 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Grk6-206ENSMUST00000224995 2971 ntBASIC19.79■□□□□ 0.76
Cpsf2O35218 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.79■□□□□ 0.76
Cpsf2O35218 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cpsf2O35218 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf2O35218 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf2O35218 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cpsf2O35218 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf2O35218 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cpsf2O35218 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf2O35218 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf2O35218 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf2O35218 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.78■□□□□ 0.76
Cpsf2O35218 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf2O35218 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cpsf2O35218 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.77■□□□□ 0.76
Cpsf2O35218 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cpsf2O35218 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf2O35218 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cpsf2O35218 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms