Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atn1O35126 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atn1O35126 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atn1O35126 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atn1O35126 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atn1O35126 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atn1O35126 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Atn1O35126 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atn1O35126 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Atn1O35126 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.14■□□□□ 0.49
Atn1O35126 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Atn1O35126 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.14■□□□□ 0.49
Atn1O35126 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.14■□□□□ 0.49
Atn1O35126 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.14■□□□□ 0.49
Atn1O35126 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atn1O35126 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atn1O35126 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Atn1O35126 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Atn1O35126 Gm45417-201ENSMUST00000209533 758 ntBASIC18.13■□□□□ 0.49
Atn1O35126 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Atn1O35126 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Atn1O35126 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.13■□□□□ 0.49
Atn1O35126 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atn1O35126 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.13■□□□□ 0.49
Atn1O35126 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Atn1O35126 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Atn1O35126 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.12■□□□□ 0.49
Atn1O35126 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.12■□□□□ 0.49
Atn1O35126 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atn1O35126 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.11■□□□□ 0.49
Atn1O35126 Gm40848-201ENSMUST00000221998 324 ntBASIC18.11■□□□□ 0.49
Atn1O35126 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atn1O35126 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atn1O35126 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Atn1O35126 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Atn1O35126 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atn1O35126 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atn1O35126 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atn1O35126 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atn1O35126 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.1■□□□□ 0.49
Atn1O35126 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atn1O35126 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Atn1O35126 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atn1O35126 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Atn1O35126 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.1■□□□□ 0.49
Atn1O35126 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atn1O35126 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Atn1O35126 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atn1O35126 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atn1O35126 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Atn1O35126 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.09■□□□□ 0.49
Atn1O35126 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms