Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11bO08712 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11bO08712 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tnfrsf11bO08712 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Tnfrsf11bO08712 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11bO08712 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11bO08712 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf11bO08712 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf11bO08712 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf11bO08712 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms