Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1bO08603 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Raet1bO08603 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Raet1bO08603 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Raet1bO08603 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.49■□□□□ 0.23
Raet1bO08603 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.49■□□□□ 0.23
Raet1bO08603 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Raet1bO08603 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.49■□□□□ 0.23
Raet1bO08603 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Raet1bO08603 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.49■□□□□ 0.23
Raet1bO08603 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Raet1bO08603 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Gm13534-201ENSMUST00000121169 513 ntBASIC16.48■□□□□ 0.23
Raet1bO08603 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.48■□□□□ 0.23
Raet1bO08603 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.48■□□□□ 0.23
Raet1bO08603 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.48■□□□□ 0.23
Raet1bO08603 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Raet1bO08603 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.48■□□□□ 0.23
Raet1bO08603 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Raet1bO08603 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Raet1bO08603 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Raet1bO08603 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.47■□□□□ 0.23
Raet1bO08603 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.47■□□□□ 0.23
Raet1bO08603 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Raet1bO08603 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Raet1bO08603 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Raet1bO08603 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Raet1bO08603 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Raet1bO08603 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Raet1bO08603 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Raet1bO08603 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.46■□□□□ 0.23
Raet1bO08603 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.46■□□□□ 0.23
Raet1bO08603 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Raet1bO08603 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Raet1bO08603 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.45■□□□□ 0.22
Raet1bO08603 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Raet1bO08603 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Raet1bO08603 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Raet1bO08603 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.45■□□□□ 0.22
Raet1bO08603 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.45■□□□□ 0.22
Raet1bO08603 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Raet1bO08603 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Raet1bO08603 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Raet1bO08603 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Gm5874-201ENSMUST00000096101 508 ntBASIC16.44■□□□□ 0.22
Raet1bO08603 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Raet1bO08603 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Raet1bO08603 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1bO08603 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Raet1bO08603 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1bO08603 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1bO08603 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1bO08603 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Raet1bO08603 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms