Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3139J3QK78 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3139J3QK78 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.53■□□□□ 0.56
Gm3139J3QK78 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3139J3QK78 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.52■□□□□ 0.56
Gm3139J3QK78 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.52■□□□□ 0.56
Gm3139J3QK78 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.52■□□□□ 0.56
Gm3139J3QK78 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3139J3QK78 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Gm3139J3QK78 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Gm3139J3QK78 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3139J3QK78 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm3139J3QK78 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm3139J3QK78 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.5■□□□□ 0.55
Gm3139J3QK78 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3139J3QK78 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3139J3QK78 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms