Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC9.11□□□□□ -0.95
Rnf213E9Q555 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rnf213E9Q555 AC160393.1-201ENSMUST00000218378 1279 ntBASIC9.11□□□□□ -0.95
Rnf213E9Q555 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rnf213E9Q555 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC9.1□□□□□ -0.95
Rnf213E9Q555 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rnf213E9Q555 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Gm5587-201ENSMUST00000206270 674 ntBASIC9.09□□□□□ -0.95
Rnf213E9Q555 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC9.09□□□□□ -0.95
Rnf213E9Q555 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Gm8784-201ENSMUST00000222096 1435 ntBASIC9.09□□□□□ -0.95
Rnf213E9Q555 Mzt1-203ENSMUST00000227948 952 ntBASIC9.09□□□□□ -0.95
Rnf213E9Q555 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Gm20100-201ENSMUST00000209418 2272 ntBASIC9.09□□□□□ -0.95
Rnf213E9Q555 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rnf213E9Q555 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC9.08□□□□□ -0.96
Rnf213E9Q555 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Mir3081-201ENSMUST00000175305 84 ntBASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Gm43438-201ENSMUST00000198133 379 ntBASIC9.08□□□□□ -0.96
Rnf213E9Q555 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rnf213E9Q555 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rnf213E9Q555 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rnf213E9Q555 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.07□□□□□ -0.96
Rnf213E9Q555 Gm7791-201ENSMUST00000219066 539 ntBASIC9.07□□□□□ -0.96
Rnf213E9Q555 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rnf213E9Q555 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms