Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Gm11421-201ENSMUST00000122124 294 ntBASIC18.6■□□□□ 0.57
Gm28043E0CXC2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Gm26833-201ENSMUST00000180899 440 ntBASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Gm28043E0CXC2 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.6■□□□□ 0.57
Gm28043E0CXC2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28043E0CXC2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
Gm28043E0CXC2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28043E0CXC2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28043E0CXC2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Gm28043E0CXC2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Gm28043E0CXC2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28043E0CXC2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28043E0CXC2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Gm28043E0CXC2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28043E0CXC2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28043E0CXC2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28043E0CXC2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28043E0CXC2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.56■□□□□ 0.56
Gm28043E0CXC2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28043E0CXC2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms