Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC26.42■■□□□ 1.82
Hfm1D3Z4R1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Hfm1D3Z4R1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Hfm1D3Z4R1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Hfm1D3Z4R1 Gm7712-202ENSMUST00000222331 1510 ntBASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Gm7367-201ENSMUST00000057611 492 ntBASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC26.41■■□□□ 1.82
Hfm1D3Z4R1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Hfm1D3Z4R1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Hfm1D3Z4R1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Hfm1D3Z4R1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Hfm1D3Z4R1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Hfm1D3Z4R1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
Hfm1D3Z4R1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Hfm1D3Z4R1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Hfm1D3Z4R1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Hfm1D3Z4R1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
Hfm1D3Z4R1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Hfm1D3Z4R1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
Hfm1D3Z4R1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC26.39■■□□□ 1.81
Hfm1D3Z4R1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC26.38■■□□□ 1.81
Hfm1D3Z4R1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hfm1D3Z4R1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hfm1D3Z4R1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hfm1D3Z4R1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hfm1D3Z4R1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 Gm38285-201ENSMUST00000192928 922 ntBASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC26.36■■□□□ 1.81
Hfm1D3Z4R1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Hfm1D3Z4R1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hfm1D3Z4R1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Hfm1D3Z4R1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Hfm1D3Z4R1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Hfm1D3Z4R1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Gm12382-201ENSMUST00000122005 922 ntBASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
Hfm1D3Z4R1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC26.32■■□□□ 1.8
Hfm1D3Z4R1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC26.32■■□□□ 1.8
Hfm1D3Z4R1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hfm1D3Z4R1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hfm1D3Z4R1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms