Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.65■□□□□ 0.26
Shank1D3YZU1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shank1D3YZU1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Shank1D3YZU1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Shank1D3YZU1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Shank1D3YZU1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Gm7367-201ENSMUST00000057611 492 ntBASIC16.64■□□□□ 0.25
Shank1D3YZU1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Gm6659-201ENSMUST00000174752 547 ntBASIC16.64■□□□□ 0.25
Shank1D3YZU1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shank1D3YZU1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shank1D3YZU1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.62■□□□□ 0.25
Shank1D3YZU1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.62■□□□□ 0.25
Shank1D3YZU1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shank1D3YZU1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.61■□□□□ 0.25
Shank1D3YZU1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Gm21814-202ENSMUST00000203277 873 ntBASIC16.61■□□□□ 0.25
Shank1D3YZU1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shank1D3YZU1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shank1D3YZU1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shank1D3YZU1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms