Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lonrf1D3YY23 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lonrf1D3YY23 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Lonrf1D3YY23 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lonrf1D3YY23 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lonrf1D3YY23 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.15■□□□□ 0.66
Lonrf1D3YY23 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.14■□□□□ 0.66
Lonrf1D3YY23 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lonrf1D3YY23 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.13■□□□□ 0.65
Lonrf1D3YY23 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lonrf1D3YY23 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Gm43060-201ENSMUST00000200621 289 ntBASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lonrf1D3YY23 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lonrf1D3YY23 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms