Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30cD3YVI9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30cD3YVI9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.25■□□□□ 0.83
Trim30cD3YVI9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Trim30cD3YVI9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim30cD3YVI9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30cD3YVI9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30cD3YVI9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Gm5874-201ENSMUST00000096101 508 ntBASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim30cD3YVI9 AA386476-201ENSMUST00000098781 1665 ntBASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30cD3YVI9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Gm10493-201ENSMUST00000097270 612 ntBASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30cD3YVI9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Trim30cD3YVI9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.2■□□□□ 0.82
Trim30cD3YVI9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30cD3YVI9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Gm27801-201ENSMUST00000184174 223 ntBASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim30cD3YVI9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms