Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptchd4B9EKX1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd4B9EKX1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Gm10698-201ENSMUST00000182663 604 ntBASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd4B9EKX1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd4B9EKX1 Gm13158-201ENSMUST00000122007 736 ntBASIC20.02■□□□□ 0.8
Ptchd4B9EKX1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptchd4B9EKX1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptchd4B9EKX1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd4B9EKX1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Flg-201ENSMUST00000050758 1488 ntBASIC20■□□□□ 0.79
Ptchd4B9EKX1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20■□□□□ 0.79
Ptchd4B9EKX1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Gm6576-201ENSMUST00000169678 883 ntBASIC20■□□□□ 0.79
Ptchd4B9EKX1 Mir6982-201ENSMUST00000184354 68 ntBASIC20■□□□□ 0.79
Ptchd4B9EKX1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Arhgef33-211ENSMUST00000225658 473 ntBASIC20■□□□□ 0.79
Ptchd4B9EKX1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd4B9EKX1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd4B9EKX1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.98■□□□□ 0.79
Ptchd4B9EKX1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms