Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Gm15375-201ENSMUST00000119510 849 ntBASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Gm37292-201ENSMUST00000192062 758 ntBASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a6B1AVK5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col4a6B1AVK5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Gm42545-201ENSMUST00000202755 922 ntBASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Gm10138-203ENSMUST00000206952 366 ntBASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a6B1AVK5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Gm11539-201ENSMUST00000119837 557 ntBASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Gm13436-201ENSMUST00000120418 567 ntBASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Gm7889-201ENSMUST00000185591 958 ntBASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a6B1AVK5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a6B1AVK5 Gm13559-201ENSMUST00000120476 863 ntBASIC19.34■□□□□ 0.69
Col4a6B1AVK5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.34■□□□□ 0.69
Col4a6B1AVK5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Col4a6B1AVK5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a6B1AVK5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a6B1AVK5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a6B1AVK5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Gm38285-201ENSMUST00000192928 922 ntBASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Gm30025-201ENSMUST00000218555 728 ntBASIC19.33■□□□□ 0.68
Col4a6B1AVK5 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Odf3b-204ENSMUST00000227834 930 ntBASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a6B1AVK5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a6B1AVK5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms