Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IsxA1A546 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.27■□□□□ 0.36
IsxA1A546 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.27■□□□□ 0.36
IsxA1A546 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IsxA1A546 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.26■□□□□ 0.35
IsxA1A546 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
IsxA1A546 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Gm15039-201ENSMUST00000118914 875 ntBASIC17.26■□□□□ 0.35
IsxA1A546 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.26■□□□□ 0.35
IsxA1A546 Gm43530-201ENSMUST00000195920 274 ntBASIC17.26■□□□□ 0.35
IsxA1A546 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
IsxA1A546 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
IsxA1A546 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
IsxA1A546 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IsxA1A546 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.25■□□□□ 0.35
IsxA1A546 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.25■□□□□ 0.35
IsxA1A546 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.25■□□□□ 0.35
IsxA1A546 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.25■□□□□ 0.35
IsxA1A546 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.25■□□□□ 0.35
IsxA1A546 Gm10399-202ENSMUST00000202768 748 ntBASIC17.25■□□□□ 0.35
IsxA1A546 Gm40881-201ENSMUST00000223397 166 ntBASIC17.25■□□□□ 0.35
IsxA1A546 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IsxA1A546 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IsxA1A546 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.25■□□□□ 0.35
IsxA1A546 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
IsxA1A546 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.24■□□□□ 0.35
IsxA1A546 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
IsxA1A546 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IsxA1A546 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IsxA1A546 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IsxA1A546 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IsxA1A546 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IsxA1A546 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IsxA1A546 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.23■□□□□ 0.35
IsxA1A546 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IsxA1A546 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IsxA1A546 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.22■□□□□ 0.35
IsxA1A546 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.22■□□□□ 0.35
IsxA1A546 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IsxA1A546 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
IsxA1A546 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
IsxA1A546 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
IsxA1A546 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.21■□□□□ 0.35
IsxA1A546 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.21■□□□□ 0.35
IsxA1A546 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
IsxA1A546 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IsxA1A546 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IsxA1A546 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
IsxA1A546 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IsxA1A546 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IsxA1A546 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IsxA1A546 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms