Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12-1A0N8R1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Gm43173-201ENSMUST00000202246 593 ntBASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav12-1A0N8R1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12-1A0N8R1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12-1A0N8R1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12-1A0N8R1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12-1A0N8R1 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.52■□□□□ 0.08
Trav12-1A0N8R1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav12-1A0N8R1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-1A0N8R1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-1A0N8R1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12-1A0N8R1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav12-1A0N8R1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Gm21956-201ENSMUST00000179946 522 ntBASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12-1A0N8R1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Gm8493-201ENSMUST00000196881 489 ntBASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav12-1A0N8R1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12-1A0N8R1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-1A0N8R1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms