Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav19A0A0B4J1K4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav19A0A0B4J1K4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav19A0A0B4J1K4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Golgb1-201ENSMUST00000023534 498 ntBASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav19A0A0B4J1K4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav19A0A0B4J1K4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.86□□□□□ -0.19
Trav19A0A0B4J1K4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms