Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv19A0A0B4J1H4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv19A0A0B4J1H4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm38205-201ENSMUST00000192243 258 ntBASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv19A0A0B4J1H4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv19A0A0B4J1H4 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv19A0A0B4J1H4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv19A0A0B4J1H4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms