Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-1A0A0B4J1H0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Gm12933-201ENSMUST00000120203 872 ntBASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Trbv12-1A0A0B4J1H0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Trbv12-1A0A0B4J1H0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm6211-202ENSMUST00000167849 925 ntBASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm22325-201ENSMUST00000158904 308 ntBASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv12-1A0A0B4J1H0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms