Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv3A0A0A6YYE2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv3A0A0A6YYE2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv3A0A0A6YYE2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv3A0A0A6YYE2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv3A0A0A6YYE2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.32□□□□□ -0.12
Trbv3A0A0A6YYE2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Mir6538-201ENSMUST00000183713 110 ntBASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trbv3A0A0A6YYE2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms