Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh7A0A0A6YY83 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdh7A0A0A6YY83 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh7A0A0A6YY83 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Gm42569-201ENSMUST00000200539 472 ntBASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdh7A0A0A6YY83 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh7A0A0A6YY83 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh7A0A0A6YY83 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh7A0A0A6YY83 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdh7A0A0A6YY83 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh7A0A0A6YY83 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh7A0A0A6YY83 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh7A0A0A6YY83 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh7A0A0A6YY83 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh7A0A0A6YY83 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh7A0A0A6YY83 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh7A0A0A6YY83 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Gm27405-201ENSMUST00000184201 112 ntBASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh7A0A0A6YY83 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh7A0A0A6YY83 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh7A0A0A6YY83 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh7A0A0A6YY83 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh7A0A0A6YY83 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh7A0A0A6YY83 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh7A0A0A6YY83 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms