Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Dio3-201ENSMUST00000097228 1449 ntBASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm27275-201ENSMUST00000184318 272 ntBASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-43A0A0A6YXN5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ighv1-43A0A0A6YXN5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms