Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv3-3A0A0A6YWL2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms