Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm10493-201ENSMUST00000097270 612 ntBASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6d-7A0A075B6B0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-7A0A075B6B0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.33□□□□□ -0.11
Trav6d-7A0A075B6B0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-7A0A075B6B0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-7A0A075B6B0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms