Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-1A0A075B601 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-1A0A075B601 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-1A0A075B601 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav9-1A0A075B601 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Rarb-207ENSMUST00000225921 2756 ntBASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9-1A0A075B601 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Gm43017-201ENSMUST00000198296 752 ntBASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-1A0A075B601 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Gm26833-201ENSMUST00000180899 440 ntBASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-1A0A075B601 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-1A0A075B601 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Grk6-206ENSMUST00000224995 2971 ntBASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-1A0A075B601 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-1A0A075B601 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms