Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-1A0A075B5Z7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-1A0A075B5Z7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-1A0A075B5Z7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav5-1A0A075B5Z7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-1A0A075B5Z7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav5-1A0A075B5Z7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-1A0A075B5Z7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trav5-1A0A075B5Z7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav5-1A0A075B5Z7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav5-1A0A075B5Z7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav5-1A0A075B5Z7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav5-1A0A075B5Z7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms