Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Gm42778-201ENSMUST00000199644 553 ntBASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv4A0A075B5I2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trbv4A0A075B5I2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.66■□□□□ 0.58
Trbv4A0A075B5I2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trbv4A0A075B5I2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv4A0A075B5I2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv4A0A075B5I2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv4A0A075B5I2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv4A0A075B5I2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv4A0A075B5I2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv4A0A075B5I2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms