Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm28677-202ENSMUST00000186904 615 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm21321-201ENSMUST00000220179 446 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 AC124715.2-201ENSMUST00000226762 617 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm25259-201ENSMUST00000083048 193 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm17083-201ENSMUST00000165849 1366 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm37745-201ENSMUST00000193304 8163 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm37968-201ENSMUST00000195131 3201 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm12464-201ENSMUST00000121385 1016 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm22224-201ENSMUST00000157357 93 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm22811-201ENSMUST00000157468 154 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm6799-201ENSMUST00000186919 573 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 AC122539.2-201ENSMUST00000220207 404 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Gm9249-201ENSMUST00000221420 578 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cchcr1Q8K2I2 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm5915-201ENSMUST00000116136 454 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm14746-201ENSMUST00000120309 741 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm25320-201ENSMUST00000122551 324 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Defa-ps3-201ENSMUST00000142705 282 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm17051-201ENSMUST00000170787 487 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm19228-201ENSMUST00000214030 717 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 AC154307.1-201ENSMUST00000214799 90 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm4977-201ENSMUST00000215709 1262 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 AC154506.2-201ENSMUST00000225481 1276 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm43681-201ENSMUST00000201581 1903 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm44141-201ENSMUST00000204231 1583 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cchcr1Q8K2I2 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cchcr1Q8K2I2 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.06□□□□□ -0.96
Cchcr1Q8K2I2 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cchcr1Q8K2I2 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cchcr1Q8K2I2 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cchcr1Q8K2I2 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms