Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm11348-201ENSMUST00000118813 318 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm14016-201ENSMUST00000119095 486 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm42573-201ENSMUST00000202327 478 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm18024-201ENSMUST00000218516 690 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 AC132587.1-201ENSMUST00000220562 166 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 AC157650.2-201ENSMUST00000224666 328 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 AC154249.1-201ENSMUST00000226296 320 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Mir763-201ENSMUST00000103249 120 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm22660-201ENSMUST00000104193 130 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm17184-201ENSMUST00000111864 462 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm11649-201ENSMUST00000118214 375 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm13407-201ENSMUST00000118256 360 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm14450-201ENSMUST00000119984 240 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm15192-201ENSMUST00000121005 293 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm26046-201ENSMUST00000157312 166 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm2951-201ENSMUST00000169447 490 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Calm5-201ENSMUST00000183198 589 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm28006-201ENSMUST00000183841 122 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 AC139941.1-201ENSMUST00000221517 478 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 AC147096.1-201ENSMUST00000227648 352 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 AC154806.1-202ENSMUST00000227949 885 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 CT009556.2-201ENSMUST00000227980 1123 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm37995-201ENSMUST00000194958 1714 ntBASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Vps53Q8CCB4 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 AC122426.1-201ENSMUST00000214736 2235 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm15575-201ENSMUST00000119414 1581 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm5406-201ENSMUST00000120054 766 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms