Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Tpm1P58771 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm12955-201ENSMUST00000119689 957 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Gm8832-201ENSMUST00000119890 395 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm6931-201ENSMUST00000183103 371 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Gm43471-201ENSMUST00000197550 467 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm3774-201ENSMUST00000209773 435 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Gm8689-201ENSMUST00000218709 712 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Gm29783-201ENSMUST00000219398 369 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 n-R5s28-201ENSMUST00000082814 119 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Tpm1P58771 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.51□□□□□ -1.05
Tpm1P58771 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
Tpm1P58771 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.5□□□□□ -1.05
Tpm1P58771 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Tpm1P58771 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm13700-201ENSMUST00000118624 1128 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Gm11546-201ENSMUST00000120297 354 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm8948-201ENSMUST00000216371 370 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Tpm1P58771 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC8.5□□□□□ -1.05
Tpm1P58771 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Tpm1P58771 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Tpm1P58771 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.5□□□□□ -1.05
Tpm1P58771 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Tpm1P58771 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Tpm1P58771 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC8.49□□□□□ -1.05
Tpm1P58771 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Tpm1P58771 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Tpm1P58771 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Tpm1P58771 Gm25762-201ENSMUST00000103984 132 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Gm25607-201ENSMUST00000104020 127 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Gm26344-201ENSMUST00000104553 132 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Tpm1P58771 Gm14519-201ENSMUST00000118490 312 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Gm15186-201ENSMUST00000119345 563 ntBASIC8.49□□□□□ -1.05
Tpm1P58771 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC8.49□□□□□ -1.05
Tpm1P58771 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC8.49□□□□□ -1.05
Tpm1P58771 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC8.49□□□□□ -1.05
Tpm1P58771 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms