Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rrp1P56183 Klf10-202ENSMUST00000226363 2917 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm23706-201ENSMUST00000104369 82 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Gm5915-201ENSMUST00000116136 454 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm9423-201ENSMUST00000183173 997 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm19035-202ENSMUST00000194575 959 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm19161-201ENSMUST00000217958 737 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rrp1P56183 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Rrp1P56183 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.66□□□□□ -1.02
Rrp1P56183 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Rrp1P56183 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 AC125074.1-201ENSMUST00000227970 1331 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm24472-201ENSMUST00000104484 132 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Rrp1P56183 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm14056-201ENSMUST00000117198 642 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Gm14826-201ENSMUST00000121284 901 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.65□□□□□ -1.02
Rrp1P56183 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm6100-201ENSMUST00000180253 403 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Gm6931-201ENSMUST00000183103 371 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm44743-201ENSMUST00000209062 386 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rrp1P56183 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm9761-201ENSMUST00000075650 492 ntBASIC8.65□□□□□ -1.02
Rrp1P56183 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Rrp1P56183 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rrp1P56183 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rrp1P56183 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rrp1P56183 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rrp1P56183 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rrp1P56183 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rrp1P56183 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Rrp1P56183 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 Gm25608-201ENSMUST00000104021 132 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Gm23094-201ENSMUST00000157551 322 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rrp1P56183 Scgb2b30-201ENSMUST00000187013 336 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Scgb2b10-201ENSMUST00000191403 318 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Gm6394-201ENSMUST00000197077 477 ntBASIC8.64□□□□□ -1.03
Rrp1P56183 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.64□□□□□ -1.03
Rrp1P56183 Gm45475-201ENSMUST00000209381 309 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms